Skip to content

Using JSON file with Visualize view does not work #1

Description

@wk9874

If I try to use data from a JSON file with the visualizer, it does not work.

What I did:
python inflammation-analysis.py --view visualize --patient 1 --file json patients.json

Result:
Traceback (most recent call last):
File "/home/wk9874/Documents/rse_training/python-intermediate-inflammation/inflammation-analysis.py", line 78, in
main(args)
File "/home/wk9874/Documents/rse_training/python-intermediate-inflammation/inflammation-analysis.py", line 30, in main
'average': models.daily_mean(inflammation_data),
File "/home/wk9874/Documents/rse_training/python-intermediate-inflammation/inflammation/models.py", line 26, in daily_mean
return np.mean(data, axis=0)
File "<array_function internals>", line 180, in mean
File "/home/wk9874/Documents/rse_training/python-intermediate-inflammation/venv/lib/python3.10/site-packages/numpy/core/fromnumeric.py", line 3432, in mean
return _methods._mean(a, axis=axis, dtype=dtype,
File "/home/wk9874/Documents/rse_training/python-intermediate-inflammation/venv/lib/python3.10/site-packages/numpy/core/_methods.py", line 180, in _mean
ret = umr_sum(arr, axis, dtype, out, keepdims, where=where)
TypeError: unsupported operand type(s) for +: 'Patient' and 'Patient'

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions