Skip to content
View WillemB2104's full-sized avatar

Highlights

  • Pro

Block or report WillemB2104

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
WillemB2104/README.md

Willem B. Bruin

I’m a postdoctoral researcher in precision psychiatry: the effort to tailor psychiatric diagnosis and treatment to the individual patient, rather than to the average of many. I hold positions at Amsterdam UMC and Leiden University. I work across obsessive-compulsive, anxiety and mood disorders, using brain scans from thousands of people, machine learning, and studies that follow the same individuals over many years, to understand individual differences rather than the “average” patient. Most of it happens through international consortia: ENIGMA-OCD, ENIGMA-ANXIETY and GEMRIC.

What you'll find here

Preprocessing and analysis pipelines for MRI data, and code behind the consortium papers listed below. A model that only works on the data it was built from hasn't told us much, so I try to keep the methods inspectable.

Selected work

The functional connectome in OCD ENIGMA-OCD mega-analysis, 2,052 participants across 28 sites · Molecular Psychiatry
Predicting ECT outcome in depression Multimodal biomarker, GEMRIC consortium · Psychological Medicine
Brain-based classification of youth anxiety ENIGMA-Anxiety, 3,343 participants · Nature Mental Health
Structural biomarkers for OCD: medication matters ENIGMA-OCD, 4,372 participants · Translational Psychiatry

Elsewhere

Website · ORCID · Google Scholar · LinkedIn

My publication list updates itself weekly from ORCID, using a small script and a GitHub Action. Reuse it if it's useful to you.

Popular repositories Loading

  1. Bruin-2020-TP Bruin-2020-TP Public

    Python 2 2

  2. Bruin-2026-MP Bruin-2026-MP Public

    Linear mixed model mega-analyses for the ENIGMA Panic Disorder working group

    R 1 1

  3. Dataprocessing Dataprocessing Public

    Minor Programmeren - Willem Bruin 10209735

    HTML

  4. rsfmri_nipype rsfmri_nipype Public

    Resting state pre-processing pipeline build with Nipype, using FSL (FEAT/MELODIC) defaults

    Python

  5. rsfMRI-preprocessing-sh rsfMRI-preprocessing-sh Public

    rsfMRI preprocessing pipeline bash scripts using ANTs, FSL & C3D

    Shell

  6. pymer4 pymer4 Public

    Forked from ejolly/pymer4

    All the convenience of lme4 in python

    Python