Proposed HDF5 input format and draft implementation - #224

Merged

The9Cat merged 55 commits into

develfrom

Jul 7, 2026

Commits on Jul 4, 2026

Added a development code-timing helper
Martin D. Weinberg
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95becff
Added bods2hdf5
Martin D. Weinberg
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435565d
Change the executable and source file name to hdf5bods
Martin D. Weinberg
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1710889
Added some OpenMP parallelism for a bit more throughput
Martin D. Weinberg
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bea3f85
Read exp-style hdf5 input files in Component
Martin D. Weinberg
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89dcf59
Give the user a hint if no conversion mode is specified
Martin D. Weinberg
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264da15
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Updates for automatic datatype detection
Martin D. Weinberg
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702a031
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2fd10ed
Remove unused mismatch flag in hdf5bods verification
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42e4f25

Commits on Jul 5, 2026

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0930ad6
Verify aux fields in hdf5bods roundtrip check
Copilot
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35a1abd
Use integer-safe aux-int diff in verify mode
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2f3d782
White-space changes only for readability
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e6db8e3
Fix m-field comment to mass
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2700ef8
Added compression filter selection for testing
Martin D. Weinberg
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35b3785
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
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ab9ca77
Add optional HDF5 particle index support
Copilot
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06a3a5a
Minor change to option documentation only
Martin D. Weinberg
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fac2cbe
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aa11000
Added some Doxygen documentation to the Component header [no ci]
Martin D. Weinberg
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3823cff
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
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c1d573d
Looks like garbled merged; fix propsed
Martin D. Weinberg
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1f9b797

Commits on Jul 6, 2026

Move precision detection into the dataset reader function
Martin D. Weinberg
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3a090f4
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72c66c3
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4df6f29
docs: update Component.H to reflect per-dataset independent precision detection
Copilot
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f18ed1f
Update header reader to read the whole line rather than use the file stream to make sure that any trailing white space is ignored
Martin D. Weinberg
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b8e2546
Merge branch 'InitFromHDF5' of github.com:EXP-code/EXP into InitFromHDF5
Martin D. Weinberg
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7dd3067
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a956778
Some previous reworking during review left these variable undefined
Martin D. Weinberg
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01079aa

Commits on Jul 7, 2026

Version bump
Martin D. Weinberg
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3c46a4d
Merge branch 'devel' into InitFromHDF5. Fixed version numbers.
Martin D. Weinberg
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a1a52b3